I've got my data, now what? The frontier of genomics data mining and visualization

Jamie Rosner

University of British Columbia

Jamie Rosner is the Life Sciences Analyst for the ARC group at UBC. He also serves as co-lead of the Compute Canada Bioinformatics National Team, and is a member of the Compute Canada National Software Carpentry Team. He holds bachelor degrees in Computer Science from the University of Waterloo and Sociology from the University of Manitoba. Jamie worked at the Vancouver Prostate Centre in the mid-2000’s where he was the bioengineering lead in charge of microarray R&D and production. Since 2008, he has been involved in bioinformatics, data management, and software development for next-generation sequencing (NGS) data in HPC cluster environments. Most recently, he worked at the BC Cancer Research Centre developing NGS analysis pipelines, data management and visualization solutions.

Abstract

Genomics data mining and visualization has long presented a challenge for the bioinformatics community. But now, as next generation sequencing (NGS) data generation has become both cheaper and more accessible, the volume of... [ view full abstract ]

Authors

  1. Jamie Rosner (University of British Columbia)

Topic Areas

Advanced Research Computing (ARC): Research data management: Challenges, opportunities and , Advanced Research Computing (ARC): Innovations in platform / portal tools & software devel , Advanced Research Computing (ARC): Tools, techniques and advances in data visualization

Session

HPC2.1.1 » Research Data Management (10:00 - Tuesday, 21st June, CCIS 1-160, room sponsored by Obsidian)

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